How can I place labels in the scene, especially for stereo figures ?
It is not possible to place sophisticated labels within the scene, the labels obtained by shift-clicking on an atom are not guaranteed to be written out. I recommend to use an image manipulation tool such as gimp to place labels in scene after exporting it.
Alignment of stereo-labels is not as difficult as it may seem. the crucial point is the exact position of the left and right label on the horizontal axis (ie identical y coordinate). To achieve this, a label is placed on one side, copied, and placed in the other stereo half at the same y-coordinate and approximate x-position. In fact, it should not be the same x-position because this will remove the stereo-effect.